Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| disulphide bond corrector protein dsbc | SAMN05421827_10330 | Not Available | + | 1148498 - 1148947 | 16826.7 |
| thiol:disulfide interchange protein dsbd | SAMN05421827_10331 | Not Available | + | 1149085 - 1150779 | 61615.3 |
| 6-phosphofructokinase 1 | SAMN05421827_10332 | Not Available | + | 1150772 - 1151755 | 35280.5 |
| uncharacterized conserved protein ybjq, upf0145 family | SAMN05421827_10333 | Not Available | - | 1151845 - 1152168 | 11144.5 |
| hypothetical protein | SAMN05421827_10334 | Not Available | + | 1152347 - 1155379 | 113776.0 |
| 5'(3')-deoxyribonucleotidase | SAMN05421827_10335 | Not Available | - | 1155440 - 1155961 | 20343.3 |
| small subunit ribosomal protein s16 | SAMN05421827_10336 | Not Available | + | 1156106 - 1156651 | 19395.9 |
| 16s rrna processing protein rimm | SAMN05421827_10337 | Not Available | + | 1156770 - 1157300 | 20626.4 |
| hypothetical protein | SAMN05421827_10338 | Not Available | + | 1157374 - 1157802 | 16161.4 |
| hypothetical protein | SAMN05421827_10339 | Not Available | + | 1157766 - 1158029 | 9701.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.