Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc carboxypeptidase | SAMN05421827_10310 | Not Available | + | 1124439 - 1127126 | 99892.1 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN05421827_10311 | Not Available | + | 1127435 - 1128151 | 26938.7 |
| hypothetical protein | SAMN05421827_10312 | Not Available | - | 1128346 - 1128564 | 8418.61 |
| hypothetical protein | SAMN05421827_10313 | Not Available | - | 1128565 - 1129701 | 43547.5 |
| transcription-repair coupling factor (superfamily ii helicase) | SAMN05421827_10314 | Not Available | - | 1129793 - 1133131 | 126358.0 |
| protein of unknown function | SAMN05421827_10315 | Not Available | + | 1133362 - 1133658 | 11220.7 |
| tm2 domain-containing protein | SAMN05421827_10316 | Not Available | + | 1133664 - 1134050 | 14332.8 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN05421827_10317 | Not Available | + | 1134168 - 1135265 | 40824.1 |
| hypothetical protein | SAMN05421827_10318 | Not Available | + | 1135265 - 1136008 | 28318.9 |
| tetratricopeptide repeat-containing protein | SAMN05421827_10319 | Not Available | + | 1136142 - 1137665 | 57251.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.