Xanthomonas oryzae pv. oryzicola BLS256

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas oryzae pv. oryzicola BLS256 is a rod-shaped, Gram-negative bacterium that is classified as an aerobe and is typically associated with host organisms. This microbe is part of the Xanthomonadaceae family and is known to thrive in environments where it can interact closely with its host, indicating its adaptation to a host-associated habitat. The aerobic nature of X. oryzae pv. oryzicola suggests that it relies on oxygen for its metabolic processes, which may influence its distribution and survival in various ecological niches. The rod shape of this bacterium is characteristic of many members within the Xanthomonas genus, contributing to its ability to colonize and persist in plant tissues. This morphological trait may enhance its motility and colonization capabilities in host environments, potentially facilitating interactions with plant immune systems. Understanding the ecological role of Xanthomonas oryzae pv. oryzicola BLS256 can provide insights into its dynamics within agricultural systems, particularly in rice cultivation, where interactions with the host plant could influence disease management strategies. The bacterium's aerobe status and host-associated lifestyle may also offer perspectives on its role in nutrient cycling and plant health within its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas oryzae
Strainpv. oryzicola BLS256

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Xanthomonas oryzae pv. oryzicola BLS256
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas oryzae pv. oryzicola BLS256


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
membrane dipeptidaseXOC_RS22225Not Available-141109 - 1412765967.39
membrane dipeptidaseXOC_RS20940Not Available+141389 - 14178513723.3
membrane dipeptidaseXOC_RS00605Not Available+141831 - 14302142365.2
duf1868 domain-containing proteinXOC_RS00610Not Available-143335 - 14412029090.6
tonb-dependent receptorXOC_RS00615Not Available-144131 - 14678896727.4
rok family proteinXOC_RS00620Not Available+146892 - 14804940915.2
type iii secretion system effector avirulence protein avrbs2XOC_RS00625Not Available+148240 - 15038478644.0
ribonuclease h-like domain-containing proteinXOC_RS00630Not Available-150859 - 15226250217.0
dead/deah box helicaseXOC_RS00635P50830-152682 - 15517790849.8
hemolysin iii family proteinXOC_RS00640P67155+155354 - 15601624150.2

Displaying genes 121 – 130 of 4184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites