Parabacteroides goldsteinii str. 910340

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides goldsteinii str. 910340 is a Gram-negative, anaerobic bacterium that belongs to the diverse group of bacteria residing in the human gastrointestinal tract. As a member of the genus Parabacteroides, this strain is adapted to thrive in oxygen-depleted environments, which is characteristic of the gut microbiome. The Gram-negative nature of P. goldsteinii indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, a feature that can influence its interactions within the microbiome and its response to antibiotics. The anaerobic requirement signifies that P. goldsteinii relies on fermentation or other anaerobic metabolic processes for energy production, which is essential for its survival in the intestinal niche where oxygen levels are minimal. This metabolic characteristic may play a role in the broader microbial community dynamics, as anaerobes like P. goldsteinii contribute to the complex interactions that underpin gut homeostasis. Furthermore, the existence of Parabacteroides species, including P. goldsteinii, is indicative of the potential for diverse metabolic pathways that can impact nutrient availability and host health. Understanding the characteristics of P. goldsteinii str. 910340 may provide insights into its function within the gut microbiome, including its potential roles in fermentation processes and the modulation of the host's immune response. This highlights the significance of anaerobic bacteria in maintaining gut health and balance within the microbial ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides goldsteinii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides goldsteinii str. 910340

Accession NumberLFJV00000000.1

Gene Summary

Adenine Count

1949139 bp

Thymine Count

1924387 bp

Guanine Count

1471786 bp

Cytosine Count

1506556 bp

Genome Length

6851868 bp

Protein-coding Genes

5247 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase large subunitACM15_11255Not Available+3044220 - 304583661353.5
Putative head portal proteinACM15_11260Q9ZXB2+3045882 - 304707244706.7
Putative prohead proteaseACM15_11265Not Available+3047117 - 304772523287.3
Major capsid proteinACM15_11270Not Available+3047754 - 304895643135.4
Head-tail connector iiACM15_11275Not Available+3048963 - 304925911074.1
hypothetical proteinACM15_11280Not Available+3049256 - 304958212477.2
hypothetical proteinACM15_11285Not Available+3049582 - 305001616005.6
hypothetical proteinACM15_11290Not Available+3050016 - 305040214690.6
hypothetical proteinACM15_11295Not Available+3050408 - 305091117387.6
Tail length tape measure proteinACM15_11305Q6KGH8+3051598 - 3054969122966.0

Displaying genes 1 – 10 of 5323 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

478 records
Metabolite IDMetabolite nameStructureCAS number
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002243S-methyl-5'-thioinosineC11H14N4O4SChemical structure of S-methyl-5'-thioinosineNot available
Average298.32Da
Monoisotopic298.0735761Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002483ergosteryl 3-beta-D-glucosideC34H54O6Chemical structure of ergosteryl 3-beta-D-glucosideNot available
Average558.789Da
Monoisotopic558.39203946Da
BASm0002546(indol-3-yl)acetyl-CoAC31H39N8O17P3SChemical structure of (indol-3-yl)acetyl-CoANot available
Average920.68Da
Monoisotopic920.1388683Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0002715(6S)-5-formyl-5,6,7,8-tetrahydrofolateC20H21N7O7Chemical structure of (6S)-5-formyl-5,6,7,8-tetrahydrofolateNot available
Average471.431Da
Monoisotopic471.1513432Da
BASm0002749ADP-alpha-D-glucoseC16H23N5O15P2Chemical structure of ADP-alpha-D-glucoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da

Displaying 41–50 of 478 metabolites