Parabacteroides goldsteinii str. 910340

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides goldsteinii str. 910340 is a Gram-negative, anaerobic bacterium that belongs to the diverse group of bacteria residing in the human gastrointestinal tract. As a member of the genus Parabacteroides, this strain is adapted to thrive in oxygen-depleted environments, which is characteristic of the gut microbiome. The Gram-negative nature of P. goldsteinii indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, a feature that can influence its interactions within the microbiome and its response to antibiotics. The anaerobic requirement signifies that P. goldsteinii relies on fermentation or other anaerobic metabolic processes for energy production, which is essential for its survival in the intestinal niche where oxygen levels are minimal. This metabolic characteristic may play a role in the broader microbial community dynamics, as anaerobes like P. goldsteinii contribute to the complex interactions that underpin gut homeostasis. Furthermore, the existence of Parabacteroides species, including P. goldsteinii, is indicative of the potential for diverse metabolic pathways that can impact nutrient availability and host health. Understanding the characteristics of P. goldsteinii str. 910340 may provide insights into its function within the gut microbiome, including its potential roles in fermentation processes and the modulation of the host's immune response. This highlights the significance of anaerobic bacteria in maintaining gut health and balance within the microbial ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides goldsteinii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides goldsteinii str. 910340

Accession NumberLFJV00000000.1

Gene Summary

Adenine Count

1949139 bp

Thymine Count

1924387 bp

Guanine Count

1471786 bp

Cytosine Count

1506556 bp

Genome Length

6851868 bp

Protein-coding Genes

5247 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase large subunitACM15_11255Not Available+3044220 - 304583661353.5
Putative head portal proteinACM15_11260Q9ZXB2+3045882 - 304707244706.7
Putative prohead proteaseACM15_11265Not Available+3047117 - 304772523287.3
Major capsid proteinACM15_11270Not Available+3047754 - 304895643135.4
Head-tail connector iiACM15_11275Not Available+3048963 - 304925911074.1
hypothetical proteinACM15_11280Not Available+3049256 - 304958212477.2
hypothetical proteinACM15_11285Not Available+3049582 - 305001616005.6
hypothetical proteinACM15_11290Not Available+3050016 - 305040214690.6
hypothetical proteinACM15_11295Not Available+3050408 - 305091117387.6
Tail length tape measure proteinACM15_11305Q6KGH8+3051598 - 3054969122966.0

Displaying genes 1 – 10 of 5323 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

478 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001789(3R)-citramalateC5H6O5Chemical structure of (3R)-citramalateNot available
Average146.099Da
Monoisotopic146.0226205Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002041L-galactoseC6H12O6Chemical structure of L-galactoseNot available
Average180.156Da
Monoisotopic180.0633881Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da

Displaying 31–40 of 478 metabolites