Parabacteroides goldsteinii str. 910340

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides goldsteinii str. 910340 is a Gram-negative, anaerobic bacterium that belongs to the diverse group of bacteria residing in the human gastrointestinal tract. As a member of the genus Parabacteroides, this strain is adapted to thrive in oxygen-depleted environments, which is characteristic of the gut microbiome. The Gram-negative nature of P. goldsteinii indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, a feature that can influence its interactions within the microbiome and its response to antibiotics. The anaerobic requirement signifies that P. goldsteinii relies on fermentation or other anaerobic metabolic processes for energy production, which is essential for its survival in the intestinal niche where oxygen levels are minimal. This metabolic characteristic may play a role in the broader microbial community dynamics, as anaerobes like P. goldsteinii contribute to the complex interactions that underpin gut homeostasis. Furthermore, the existence of Parabacteroides species, including P. goldsteinii, is indicative of the potential for diverse metabolic pathways that can impact nutrient availability and host health. Understanding the characteristics of P. goldsteinii str. 910340 may provide insights into its function within the gut microbiome, including its potential roles in fermentation processes and the modulation of the host's immune response. This highlights the significance of anaerobic bacteria in maintaining gut health and balance within the microbial ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides goldsteinii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides goldsteinii str. 910340

Accession NumberLFJV00000000.1

Gene Summary

Adenine Count

1949139 bp

Thymine Count

1924387 bp

Guanine Count

1471786 bp

Cytosine Count

1506556 bp

Genome Length

6851868 bp

Protein-coding Genes

5247 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase large subunitACM15_11255Not Available+3044220 - 304583661353.5
Putative head portal proteinACM15_11260Q9ZXB2+3045882 - 304707244706.7
Putative prohead proteaseACM15_11265Not Available+3047117 - 304772523287.3
Major capsid proteinACM15_11270Not Available+3047754 - 304895643135.4
Head-tail connector iiACM15_11275Not Available+3048963 - 304925911074.1
hypothetical proteinACM15_11280Not Available+3049256 - 304958212477.2
hypothetical proteinACM15_11285Not Available+3049582 - 305001616005.6
hypothetical proteinACM15_11290Not Available+3050016 - 305040214690.6
hypothetical proteinACM15_11295Not Available+3050408 - 305091117387.6
Tail length tape measure proteinACM15_11305Q6KGH8+3051598 - 3054969122966.0

Displaying genes 1 – 10 of 5323 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

478 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm00014072,5-dichlorohydroquinoneC6H4Cl2O2Chemical structure of 2,5-dichlorohydroquinoneNot available
Average179Da
Monoisotopic177.9588348Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm00016432,5-dichlorocyclohexa-2,5-dien-1,4-diolC6H6Cl2O2Chemical structure of 2,5-dichlorocyclohexa-2,5-dien-1,4-diolNot available
Average181.01Da
Monoisotopic179.9744848Da
BASm0001650N-acetyl-9-O-acetylneuraminateC13H20NO10Chemical structure of N-acetyl-9-O-acetylneuraminateNot available
Average350.301Da
Monoisotopic350.109269428Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da

Displaying 21–30 of 478 metabolites