Parabacteroides goldsteinii str. 910340

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides goldsteinii str. 910340 is a Gram-negative, anaerobic bacterium that belongs to the diverse group of bacteria residing in the human gastrointestinal tract. As a member of the genus Parabacteroides, this strain is adapted to thrive in oxygen-depleted environments, which is characteristic of the gut microbiome. The Gram-negative nature of P. goldsteinii indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, a feature that can influence its interactions within the microbiome and its response to antibiotics. The anaerobic requirement signifies that P. goldsteinii relies on fermentation or other anaerobic metabolic processes for energy production, which is essential for its survival in the intestinal niche where oxygen levels are minimal. This metabolic characteristic may play a role in the broader microbial community dynamics, as anaerobes like P. goldsteinii contribute to the complex interactions that underpin gut homeostasis. Furthermore, the existence of Parabacteroides species, including P. goldsteinii, is indicative of the potential for diverse metabolic pathways that can impact nutrient availability and host health. Understanding the characteristics of P. goldsteinii str. 910340 may provide insights into its function within the gut microbiome, including its potential roles in fermentation processes and the modulation of the host's immune response. This highlights the significance of anaerobic bacteria in maintaining gut health and balance within the microbial ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides goldsteinii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides goldsteinii str. 910340

Accession NumberLFJV00000000.1

Gene Summary

Adenine Count

1949139 bp

Thymine Count

1924387 bp

Guanine Count

1471786 bp

Cytosine Count

1506556 bp

Genome Length

6851868 bp

Protein-coding Genes

5247 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+5 - 1546Not Available
hypothetical proteinACM15_00005Not Available+114 - 180264281.6
23s ribosomal rnaNot AvailableNot Available+1987 - 4867Not Available
secretion protein porACM15_00010Not Available+2017 - 240314064.0
peptidase m16ACM15_00020Not Available+4481 - 7300106315.0
5s ribosomal rnaNot AvailableNot Available+4972 - 5082Not Available
atpase aaaACM15_00025Not Available+7438 - 898560848.0
zinc proteaseACM15_00030Q04805+9086 - 1030646163.3
sodium:alanine symporterACM15_00035O31464-10396 - 1179650045.2
cell division protein ftsxACM15_00040Not Available+12294 - 1465488038.9

Displaying genes 11 – 20 of 5323 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

478 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da

Displaying 1–10 of 478 metabolites