Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprocola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprocola
Accession NumberQRUU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DWY20_00245 | Not Available | + | 59678 - 60985 | 47537.1 |
| 16s rrna processing protein rimm | DWY20_00250 | Not Available | + | 60990 - 61502 | 19743.6 |
| m23 family peptidase | DWY20_00255 | Not Available | + | 61513 - 62376 | 32590.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DWY20_00260 | Not Available | + | 62379 - 63536 | 42719.9 |
| rip metalloprotease rsep | DWY20_00265 | Not Available | + | 63578 - 64918 | 50893.3 |
| s9 family peptidase | DWY20_00270 | Not Available | + | 65005 - 67434 | 93801.6 |
| uracil-dna glycosylase | DWY20_00275 | Not Available | + | 67462 - 68124 | 25441.4 |
| lytic transglycosylase domain-containing protein | DWY20_00280 | Not Available | - | 68328 - 69257 | 35564.7 |
| hypothetical protein | DWY20_00285 | Not Available | - | 69347 - 69817 | 17473.4 |
| duf2007 domain-containing protein | DWY20_00290 | Not Available | - | 69814 - 70044 | 8270.0 |
Pathways
173 pathways
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation
Fatty Acid Oxidation
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Laurate)
Fatty Acid Oxidation (Laurate)
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism

