Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | Ss046 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Yes |
Genome Summary
Shigella sonnei Ss046
Accession NumberNC_009347.1
Gene Summary
Adenine Count
529 bp
Thymine Count
582 bp
Guanine Count
551 bp
Cytosine Count
439 bp
Genome Length
2101 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | SSON_RS25315 | Not Available | - | 4781 - 5257 | 18645.6 |
| shet2/espl2 family type iii secretion system effector toxin | SSON_RS25320 | Not Available | - | 5491 - 7200 | 65015.7 |
| type iii secretion system effector phosphothreonine lyase | SSON_RS25325 | Not Available | - | 7632 - 8351 | 27902.4 |
| is3 family transposase | SSON_RS25330 | Not Available | - | 8476 - 9039 | 22055.9 |
| is3 family transposase | SSON_RS30065 | Not Available | + | 9023 - 9281 | 9083.8 |
| hypothetical protein | SSON_RS25335 | Not Available | - | 9390 - 9968 | 21984.5 |
| is3 family transposase | SSON_RS33925 | Not Available | - | 10022 - 10280 | 8481.25 |
| is3 family transposase | SSON_RS33930 | Not Available | - | 10394 - 10513 | 4430.23 |
| is630-like element is630 family transposase | SSON_RS25345 | Not Available | + | 10630 - 11661 | 39395.8 |
| is3 family transposase | SSON_RS30080 | Not Available | - | 11679 - 11786 | 3969.78 |
Pathways
1 pathway
Virulence (virB operon activation)
Virulence (virB operon activation)

