Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | Ss046 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Yes |
Genome Summary
Shigella sonnei Ss046
Accession NumberNC_009347.1
Gene Summary
Adenine Count
529 bp
Thymine Count
582 bp
Guanine Count
551 bp
Cytosine Count
439 bp
Genome Length
2101 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system phd/yefm family antitoxin | SSON_RS26415 | Not Available | + | 182581 - 182832 | 9225.94 |
| type ii toxin-antitoxin system rele family toxin | SSON_RS26420 | Not Available | + | 182829 - 183116 | 11147.9 |
| is91 family transposase | SSON_RS26425 | Not Available | - | 183349 - 184548 | 45700.9 |
| hypothetical protein | SSON_RS33390 | Not Available | - | 184558 - 184746 | 6885.48 |
| transposase | SSON_RS26435 | Not Available | + | 184802 - 185026 | 8991.93 |
| is3 family transposase | SSON_RS32845 | Not Available | + | 185165 - 185320 | 5796.98 |
| t3ss effector e3 ubiquitin-protein ligase ipah1.4 | SSON_RS26445 | Not Available | - | 185350 - 187077 | 64939.1 |
| is3 family transposase | SSON_RS30360 | Not Available | - | 187467 - 187686 | 8019.56 |
| is3 family transposase | SSON_RS32345 | Not Available | - | 187843 - 187940 | 3780.55 |
| is91 family transposase | SSON_RS26450 | Not Available | - | 188127 - 189314 | 46388.6 |
Pathways
1 pathway
Virulence (virB operon activation)
Virulence (virB operon activation)

