Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | Ss046 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Yes |
Genome Summary
Shigella sonnei Ss046
Accession NumberNC_009347.1
Gene Summary
Adenine Count
529 bp
Thymine Count
582 bp
Guanine Count
551 bp
Cytosine Count
439 bp
Genome Length
2101 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector ospi | SSON_RS33350 | Not Available | - | 137720 - 138358 | 23342.3 |
| is3 family transposase | SSON_RS32305 | Not Available | - | 138517 - 138987 | 17658.3 |
| is3 family transposase | SSON_RS26140 | Not Available | + | 139323 - 139508 | 7376.99 |
| is3 family transposase | SSON_RS33355 | Not Available | - | 139608 - 139817 | 7777.26 |
| transporter | SSON_RS26150 | Not Available | - | 139867 - 140118 | 9182.5 |
| is1-like element is1a family transposase | SSON_RS26155 | Not Available | + | 140624 - 141321 | 26425.2 |
| is3 family transposase | SSON_RS26165 | Not Available | + | 141331 - 141876 | 20057.2 |
| is21-like element is21 family helper atpase istb | SSON_RS26170 | Not Available | - | 141951 - 142748 | 30549.3 |
| is21-like element is21 family transposase | SSON_RS26175 | Not Available | - | 142748 - 143863 | 43456.9 |
| is3-like element is600 family transposase | SSON_RS26185 | Not Available | + | 143931 - 145087 | 44378.0 |
Pathways
1 pathway
Virulence (virB operon activation)
Virulence (virB operon activation)

