Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | Ss046 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Yes |
Genome Summary
Shigella sonnei Ss046
Accession NumberNC_009347.1
Gene Summary
Adenine Count
529 bp
Thymine Count
582 bp
Guanine Count
551 bp
Cytosine Count
439 bp
Genome Length
2101 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | SSON_RS33985 | Not Available | + | 76281 - 77090 | 29501.1 |
| type iii secretion system effector cysteine protease ipaj | SSON_RS25775 | Not Available | + | 77287 - 78066 | 28808.8 |
| virulence regulon transcriptional activator virb | SSON_RS25780 | Not Available | - | 79012 - 79941 | 35409.9 |
| phosphopantetheine-binding protein | SSON_RS25785 | Not Available | - | 80158 - 80394 | 8775.73 |
| t3ss effector invasin ipaa | SSON_RS25790 | Not Available | - | 80398 - 82299 | 70049.0 |
| type iii secretion system needle tip complex protein ipad | SSON_RS25795 | Not Available | - | 82308 - 83306 | 36655.0 |
| t3ss translocon subunit ipac | SSON_RS25800 | Not Available | - | 83357 - 84448 | 38811.6 |
| type iii secretion system translocon subunit ipab | SSON_RS25805 | Not Available | - | 84468 - 86210 | 62132.9 |
| sycd/lcrh family type iii secretion system chaperone ipgc | SSON_RS25810 | Not Available | - | 86216 - 86683 | 17757.1 |
| type iii secretion effector ipgb1 | SSON_RS25815 | Not Available | - | 86741 - 87367 | 23675.6 |
Pathways
1 pathway
Virulence (virB operon activation)
Virulence (virB operon activation)

