Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | Ss046 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Yes |
Genome Summary
Shigella sonnei Ss046
Accession NumberNC_009347.1
Gene Summary
Adenine Count
529 bp
Thymine Count
582 bp
Guanine Count
551 bp
Cytosine Count
439 bp
Genome Length
2101 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | SSON_RS33975 | Not Available | - | 48348 - 49297 | 34870.9 |
| helix-turn-helix domain-containing protein | SSON_RS25570 | Not Available | + | 49336 - 49803 | 17751.7 |
| is3 family transposase | SSON_RS30150 | Not Available | + | 49955 - 50217 | 9663.61 |
| is5-like element issfl7 family transposase | SSON_RS32230 | Not Available | + | 50243 - 51108 | 32286.8 |
| is630-like element is630 family transposase | SSON_RS25590 | Not Available | + | 51223 - 52254 | 39423.9 |
| is3 family transposase | SSON_RS33980 | Not Available | - | 52277 - 52369 | 3260.9 |
| is3 family transposase | SSON_RS32235 | Not Available | + | 52448 - 53146 | 25768.5 |
| is3 family transposase | SSON_RS30170 | Not Available | - | 53163 - 53342 | 7272.95 |
| t3ss effector e3 ubiquitin-protein ligase ipah7.8 | SSON_RS25610 | Not Available | + | 53671 - 55368 | 64561.6 |
| t3ss effector e3 ubiquitin-protein ligase ipah4.5 | SSON_RS25615 | Not Available | + | 55796 - 57520 | 65482.9 |
Pathways
1 pathway
Virulence (virB operon activation)
Virulence (virB operon activation)

