Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | Ss046 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Yes |
Genome Summary
Shigella sonnei Ss046
Accession NumberNC_009347.1
Gene Summary
Adenine Count
529 bp
Thymine Count
582 bp
Guanine Count
551 bp
Cytosine Count
439 bp
Genome Length
2101 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | SSON_RS32800 | Not Available | + | 16446 - 16583 | 5304.58 |
| type 3 secretion system effector/anti-activator ospd1 | SSON_RS25390 | Not Available | + | 16954 - 17631 | 24741.4 |
| is3 family transposase | SSON_RS33265 | Not Available | + | 17952 - 18065 | 4428.18 |
| hypothetical protein | SSON_RS33270 | Not Available | + | 18143 - 18457 | 11823.4 |
| type iii secretion effector ipgb2 | SSON_RS25400 | Not Available | + | 18740 - 19306 | 21531.7 |
| is3 family transposase | SSON_RS33945 | Not Available | - | 19568 - 19690 | 4537.27 |
| is3-like element is3h family transposase | SSON_RS25410 | Not Available | + | 19878 - 21043 | 44763.4 |
| is3 family transposase | SSON_RS25415 | Not Available | + | 21383 - 21744 | 13524.5 |
| is21 family transposase | SSON_RS25420 | Not Available | + | 21831 - 22835 | 38986.1 |
| is110-like element isec20 family transposase | SSON_RS25425 | Not Available | + | 23027 - 24223 | 43139.6 |
Pathways
1 pathway
Virulence (virB operon activation)
Virulence (virB operon activation)

