Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | Ss046 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Yes |
Genome Summary
Shigella sonnei Ss046
Accession NumberNC_009347.1
Gene Summary
Adenine Count
529 bp
Thymine Count
582 bp
Guanine Count
551 bp
Cytosine Count
439 bp
Genome Length
2101 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | SSON_RS32315 | Not Available | + | 145290 - 145721 | 16114.5 |
| t3ss effector e3 ubiquitin-protein ligase ipah9.8 | SSON_RS26195 | Not Available | + | 146464 - 148101 | 61993.5 |
| type ii toxin-antitoxin system antitoxin yaca | SSON_RS26200 | Not Available | + | 148309 - 148578 | 10186.1 |
| is3 family transposase | SSON_RS34010 | Not Available | + | 148578 - 148747 | 6672.24 |
| type iii secretion system effector protein kinase ospg | SSON_RS26205 | Not Available | + | 148830 - 149420 | 22571.7 |
| is3 family transposase | SSON_RS34015 | Not Available | + | 149777 - 150043 | 9864.23 |
| is4-like element is4 family transposase | SSON_RS26220 | Not Available | + | 150106 - 151452 | 51144.8 |
| is3 family transposase | SSON_RS34020 | Not Available | - | 151466 - 151657 | 7010.69 |
| is3 family transposase | SSON_RS26810 | Not Available | + | 151655 - 151979 | 11673.0 |
| uvrd-helicase domain-containing protein | SSON_RS26235 | Not Available | - | 152009 - 154921 | 110938.0 |
Pathways
1 pathway
Virulence (virB operon activation)
Virulence (virB operon activation)

