Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | Ss046 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Yes |
Genome Summary
Shigella sonnei Ss046
Accession NumberNC_009347.1
Gene Summary
Adenine Count
529 bp
Thymine Count
582 bp
Guanine Count
551 bp
Cytosine Count
439 bp
Genome Length
2101 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system needle length regulator spa32 | SSON_RS25920 | Not Available | + | 104158 - 105036 | 32979.5 |
| sctq family type iii secretion system ring protein spa33 | SSON_RS25925 | Not Available | + | 105030 - 105911 | 33419.4 |
| type iii secretion system export apparatus protein spa24/spap | SSON_RS25930 | Not Available | + | 105916 - 106566 | 24187.1 |
| type iii secretion system export apparatus protein spaq | SSON_RS25935 | Not Available | + | 106581 - 106841 | 9430.03 |
| type iii secretion system export apparatus protein spa29/spar | SSON_RS25940 | Not Available | + | 106841 - 107611 | 28485.5 |
| type iii secretion system export apparatus switch protein spa40/spas | SSON_RS25945 | Not Available | + | 107618 - 108646 | 39789.6 |
| biofilm/acid-resistance regulator ymgb/arir | SSON_RS25950 | Not Available | + | 108668 - 108901 | 8687.49 |
| is3 family transposase | SSON_RS32260 | Not Available | - | 109508 - 110541 | 37360.2 |
| is21-like element issso4 family transposase | SSON_RS25965 | Not Available | + | 110830 - 112365 | 59011.4 |
| is21-like element issso4 family helper atpase istb | SSON_RS25970 | Not Available | + | 112382 - 113137 | 28571.3 |
Pathways
1 pathway
Virulence (virB operon activation)
Virulence (virB operon activation)

