Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | Ss046 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Yes |
Genome Summary
Shigella sonnei Ss046
Accession NumberNC_009347.1
Gene Summary
Adenine Count
529 bp
Thymine Count
582 bp
Guanine Count
551 bp
Cytosine Count
439 bp
Genome Length
2101 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system chaperone ipga | SSON_RS25820 | Not Available | - | 87383 - 87772 | 15086.2 |
| type iii secretion system effector icsb | SSON_RS25825 | Not Available | - | 87785 - 89269 | 56278.2 |
| type iii secretion system effector inositol phosphate phosphatase | SSON_RS25830 | Not Available | + | 89583 - 91199 | 59974.3 |
| type iii secretion system chaperone ipge | SSON_RS25835 | Not Available | + | 91209 - 91571 | 13733.4 |
| type iii secretion system lytic transglycosylase ipgf | SSON_RS25840 | Not Available | + | 91571 - 92029 | 17667.4 |
| type iii secretion system protein mxig | SSON_RS25845 | Not Available | + | 92038 - 93153 | 43004.3 |
| type iii secretion system needle filament protein mxih | SSON_RS25850 | Not Available | + | 93161 - 93412 | 9265.8 |
| type iii secretion system inner rod protein mxii | SSON_RS25855 | Not Available | + | 93425 - 93718 | 10633.7 |
| sctj family type iii secretion inner membrane ring lipoprotein mxi | SSON_RS25860 | Not Available | + | 93724 - 94449 | 27524.7 |
| type iii secretion apparatus protein orga/mxik | SSON_RS25865 | Not Available | + | 94446 - 94973 | 20056.3 |
Pathways
1 pathway
Virulence (virB operon activation)
Virulence (virB operon activation)

