Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | Ss046 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Yes |
Genome Summary
Shigella sonnei Ss046
Accession NumberNC_009347.1
Gene Summary
Adenine Count
529 bp
Thymine Count
582 bp
Guanine Count
551 bp
Cytosine Count
439 bp
Genome Length
2101 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | SSON_RS25625 | Not Available | + | 57572 - 58785 | 46555.0 |
| hypothetical protein | SSON_RS34190 | Not Available | - | 58788 - 58907 | 4571.48 |
| hypothetical protein | SSON_RS33310 | Not Available | + | 59140 - 59328 | 6885.48 |
| is3 family transposase | SSON_RS25645 | Not Available | + | 59338 - 60367 | 38649.5 |
| is5-like element issfl7 family transposase | SSON_RS32245 | Not Available | + | 60545 - 61389 | 31609.0 |
| type 3 secretion system effector ospc2 | SSON_RS25665 | Not Available | - | 61538 - 62992 | 55596.6 |
| is3 family transposase | SSON_RS30175 | Not Available | + | 63417 - 63680 | 10299.5 |
| is1-like element is1a family transposase | SSON_RS25670 | Not Available | + | 63742 - 64439 | 26455.2 |
| transposase | SSON_RS25675 | Not Available | + | 64523 - 64885 | 12929.5 |
| is3 family transposase | SSON_RS25690 | Not Available | - | 65049 - 66087 | 38978.8 |
Pathways
1 pathway
Virulence (virB operon activation)
Virulence (virB operon activation)

