Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rifamycinica str. DSM 46095
Accession NumberJMQI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transmembrane anti-sigma factor | DV20_43175 | Not Available | + | 9131389 - 9132027 | 22374.9 |
| chorismate synthase | DV20_43180 | Not Available | + | 9132333 - 9133520 | 41689.8 |
| shikimate kinase | DV20_43185 | Not Available | + | 9133532 - 9134041 | 17400.8 |
| 3-dehydroquinate synthase | DV20_43190 | Not Available | + | 9134050 - 9135159 | 38655.7 |
| 3-dehydroquinate dehydratase | DV20_43195 | Not Available | + | 9135156 - 9135587 | 15291.1 |
| gcn5 family acetyltransferase | DV20_43200 | Not Available | + | 9135584 - 9136495 | 32892.8 |
| beta-xylosidase | DV20_43205 | Not Available | + | 9136684 - 9138165 | 50787.9 |
| hypothetical protein | DV20_43210 | Not Available | - | 9138323 - 9138766 | 15162.6 |
| x-pro dipeptidase | DV20_43215 | Not Available | + | 9138861 - 9139946 | 37836.9 |
| elongation factor p | DV20_43220 | Not Available | + | 9139992 - 9140555 | 20477.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.