Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rifamycinica str. DSM 46095
Accession NumberJMQI00000000.1
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | DV20_38960 | Not Available | + | 8272170 - 8272640 | 16724.2 |
| methyltransferase | DV20_38965 | Not Available | + | 8272669 - 8273448 | 27900.9 |
| glycine/betaine abc transporter substrate-binding protein | DV20_38970 | Not Available | - | 8273450 - 8274370 | 32619.8 |
| glycine/betaine abc transporter permease | DV20_38975 | Not Available | + | 8274509 - 8275207 | 24728.1 |
| glycine/betaine abc transporter permease | DV20_38980 | Not Available | + | 8275204 - 8275914 | 25394.2 |
| hypothetical protein | DV20_38985 | Not Available | - | 8275981 - 8276682 | 24909.2 |
| cadmium transporter | DV20_38990 | Not Available | - | 8276797 - 8277360 | 18809.5 |
| hypothetical protein | DV20_38995 | Not Available | + | 8277421 - 8278347 | 33832.5 |
| histidine ammonia-lyase | DV20_39000 | Not Available | - | 8278652 - 8280100 | 51173.6 |
| ornithine cyclodeaminase | DV20_39005 | Not Available | - | 8280097 - 8281104 | 36427.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.