Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rifamycinica str. DSM 46095
Accession NumberJMQI00000000.1
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cystathionine gamma-synthase | DV20_05170 | Not Available | - | 1028961 - 1030079 | 38543.2 |
| asnc family transcriptional regulator | DV20_05175 | Not Available | + | 1030138 - 1030614 | 17144.7 |
| hypothetical protein | DV20_05180 | Not Available | - | 1030617 - 1031141 | 19966.0 |
| asnc family transcriptional regulator | DV20_05185 | Not Available | - | 1031125 - 1031589 | 17201.6 |
| f420-dependent oxidoreductase | DV20_05190 | Not Available | + | 1031683 - 1032522 | 30346.5 |
| cytidine deaminase | DV20_05195 | Not Available | + | 1032519 - 1032947 | 15645.5 |
| methyltransferase | DV20_05200 | Not Available | + | 1032944 - 1033354 | 14470.0 |
| 3-hydroxybutyryl-coa dehydrogenase | DV20_05205 | Not Available | - | 1033355 - 1035124 | 62144.2 |
| pts sugar transporter subunit iia | DV20_05210 | Not Available | - | 1035244 - 1035915 | 22368.3 |
| dihydroxyacetone kinase | DV20_05215 | Not Available | - | 1035912 - 1036541 | 20504.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.