Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 411 - 527 | Not Available |
| hypothetical protein | DV20_00015 | Not Available | Positive | 624 - 2894 | 83549.1 |
| had family hydrolase | DV20_00020 | Not Available | Positive | 2887 - 3858 | 33171.3 |
| hypothetical protein | DV20_00025 | Not Available | Positive | 3876 - 4073 | 6935.02 |
| cytochrome c oxidase subunit ii | DV20_00030 | Not Available | Positive | 4079 - 4921 | 29632.5 |
| inorganic polyphosphate kinase | DV20_00035 | Not Available | Positive | 4918 - 5844 | 32803.0 |
| dna recombination protein recn | DV20_00040 | Not Available | Positive | 5978 - 7756 | 63040.0 |
| hypothetical protein | DV20_00045 | Not Available | Negative | 7808 - 8386 | 20963.0 |
| nadph:quinone reductase | DV20_00050 | Not Available | Positive | 8815 - 9801 | 34722.7 |
| hypothetical protein | DV20_00055 | Not Available | Positive | 9798 - 10973 | 42960.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.