Cupriavidus metallidurans CH34

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus metallidurans CH34. This strain was first identified in the heavy metal-contaminated sludge of a settling tank in Belgium in the late 1970s. Metal resistance functions are predominantly encoded on two plasmids, pMOL28 and pMOL30, which produce metal exporters that pump metal ions out of the cell, thus protecting intracellular macromolecules from the toxic effects of high concentrations of metal. (NCBI BioProject: bp_list[1])

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Burkholderiales
Family	Burkholderiaceae
Genus	Cupriavidus
Species	Cupriavidus metallidurans
Strain	CH34

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	Yes
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	30
Temperature range	Mesophilic
Habitat	Specialized
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Singles
Sporulation	Nonsporulating
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Cupriavidus metallidurans CH34

NC_007972.2 NC_007974.2 NC_007971.2 NC_007973.1

Gene Summary

Adenine Count

34395 bp

Thymine Count

33323 bp

Guanine Count

51333 bp

Cytosine Count

52408 bp

Genome Length

171459 bp

Protein-coding Genes

168 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

Name	Locus Tag	UniProt	Strand	Coordinates	Molecular Weight
para family protein	RMET_RS30870	Not Available	+	1 - 1191	44398.3
parb/repb/spo0j family partition protein	RMET_RS30875	Not Available	+	1188 - 2186	36525.7
helix-turn-helix domain-containing protein	RMET_RS30880	Not Available	+	2425 - 3603	43213.7
hypothetical protein	RMET_RS33345	Not Available	+	3718 - 3909	6905.81
hypothetical protein	RMET_RS31950	Not Available	+	4777 - 5484	25891.1
res family nad+ phosphorylase	RMET_RS30890	Not Available	+	5484 - 6140	24031.7
tyrosine-type recombinase/integrase	RMET_RS30895	Not Available	-	6171 - 6980	29921.0
hypothetical protein	RMET_RS31955	Not Available	+	7593 - 8423	29090.3
hypothetical protein	RMET_RS33890	Not Available	-	8962 - 9165	7497.9
hypothetical protein	RMET_RS30910	Not Available	+	9309 - 9872	21230.2

Displaying genes 1 – 10 of 6407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000250	2,5-didehydro-D-gluconateC6H7O7		`53736-12-2`	Average191.1156Da Monoisotopic191.019177578Da
BASm0000253	2-oxopent-4-enoateC5H5O3		Not available	Average113.093Da Monoisotopic113.024417601Da
BASm0000260	3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5		Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000428	3-oxoadipateC6H6O5		Not available	Average158.11Da Monoisotopic158.022620453Da
BASm0000516	6-deoxyerythronolide BC21H38O6		Not available	Average386.5228Da Monoisotopic386.2668389Da
BASm0000553	biphenyl-2,3-diolC12H10O2		Not available	Average186.2066Da Monoisotopic186.0680796Da
BASm0000592	(S)-1-phenylethanolC8H10O		Not available	Average122.1644Da Monoisotopic122.0731649Da
BASm0000599	2,5-dihydroxypyridineC5H5NO2		Not available	Average111.1Da Monoisotopic111.0320284Da
BASm0000893	crotonobetaineC7H13NO2		`927-89-9`	Average143.1836Da Monoisotopic143.0946287Da
BASm0000989	GlycerolC3H8O3		`56-81-5`	Average92.0938Da Monoisotopic92.04734412Da

Displaying 1–10 of 1772 metabolites