Treponema denticola ATCC 35405

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola ATCC 35405 is a Gram-negative, spiral-shaped bacterium that thrives under anaerobic conditions, functioning as a chemoheterotroph. This microbe is primarily found in the oral cavity, especially within periodontal tissues where it contributes to oral diseases such as periodontitis. It is considered an obligate anaerobe, meaning that it cannot grow in the presence of oxygen, relying instead on the fermentation of organic compounds to meet its nutrition needs. The spiral shape of Treponema denticola is characteristic of the spirochete family, which enables its motility through a unique axial filament structure. This allows the bacterium to navigate the viscous environment of the subgingival biofilm and adheres to tooth surfaces and periodontal pockets. It is typically found in symbiosis with other oral bacteria, forming complex microbial communities that influence host health and disease progression. As a chemoheterotroph, T. denticola derives energy from organic substrates, which include polysaccharides and proteins in the oral environment. This metabolic pathway is vital for its survival, especially in the nutrient-poor conditions of the periodontal pocket. This microbe is also noteworthy for its role in the pathogenicity of periodontal disease. It is linked to the degradation of the periodontal tissue, influencing inflammation and providing a favorable environment for further microbial colonization. Furthermore, T. denticola produces virulence factors such as proteases and endotoxins, contributing to tissue damage and the immune response. Its presence is often associated with the severity of periodontal disease, making it a target for therapeutic strategies aimed at improving oral health.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainATCC 35405

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Treponema denticola ATCC 35405

Accession NumberNC_002967.9

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2562 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1175279 - 1175294Not Available
Putative head closure proteinTDE_RS05480Not Available-1182958 - 118490173447.0
Major tail subunitTDE_RS05485Not Available-1184914 - 118550422339.7
hypothetical proteinTDE_RS05490Not Available-1185619 - 118605015835.0
Hypothetical proteinTDE_RS05495Not Available-1186064 - 118644714255.9
Putative major capsid proteinTDE_RS05500Not Available-1186516 - 118747835399.5
Hypothetical proteinTDE_RS05505Not Available-1187491 - 118833330387.4
hypothetical proteinTDE_RS05510Not Available-1188358 - 118862410173.3
Head-tail connector proteinTDE_RS05515Not Available-1188617 - 119029963844.8
Hypothetical proteinTDE_RS05520Not Available-1190352 - 119094822685.8

Displaying genes 1 – 10 of 2630 in total

Pathways

1 pathway

Metabolites

41 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017265Uridine diphosphate-N-acetylglucosamineC17H27N3O17P2Chemical structure of Uridine diphosphate-N-acetylglucosamine528-04-1
Average607.3537Da
Monoisotopic607.081569477Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0017287CarbamoylphosphateCH4NO5PChemical structure of Carbamoylphosphate590-55-6
Average141.0199Da
Monoisotopic140.982708755Da
BASm00173035-Aminoimidazole ribonucleotideC8H14N3O7PChemical structure of 5-Aminoimidazole ribonucleotide25635-88-5
Average295.1864Da
Monoisotopic295.056936329Da
BASm0017347N1-(5-Phospho-a-D-ribosyl)-5,6-dimethylbenzimidazoleC14H19N2O7PChemical structure of N1-(5-Phospho-a-D-ribosyl)-5,6-dimethylbenzimidazoleNULL
Average358.2836Da
Monoisotopic358.092987484Da
BASm00177315,10-MethenyltetrahydrofolateC20H22N7O6Chemical structure of 5,10-Methenyltetrahydrofolate7444-29-3
Average456.432Da
Monoisotopic456.163156471Da
BASm0019032Cyclic di-3',5'-guanylateC20H24N10O14P2Chemical structure of Cyclic di-3',5'-guanylateNULL
Average690.4107Da
Monoisotopic690.09486855Da
BASm00191503b-AllotetrahydrocortisolC19H35N5O6SeChemical structure of 3b-AllotetrahydrocortisolNULL
Average508.489Da
Monoisotopic509.175256Da
BASm0034704coenzyme B12C72H100CoN18O17PChemical structure of coenzyme B12NULL
Average1579.608Da
Monoisotopic1578.65834Da
BASm0034737(6S)-5,6,7,8-tetrahydrofolic acidC19H23N7O6Chemical structure of (6S)-5,6,7,8-tetrahydrofolic acidNULL
Average445.4292Da
Monoisotopic445.170981503Da

Displaying 31–40 of 41 metabolites