Treponema denticola ATCC 35405

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola ATCC 35405 is a Gram-negative, spiral-shaped bacterium that thrives under anaerobic conditions, functioning as a chemoheterotroph. This microbe is primarily found in the oral cavity, especially within periodontal tissues where it contributes to oral diseases such as periodontitis. It is considered an obligate anaerobe, meaning that it cannot grow in the presence of oxygen, relying instead on the fermentation of organic compounds to meet its nutrition needs. The spiral shape of Treponema denticola is characteristic of the spirochete family, which enables its motility through a unique axial filament structure. This allows the bacterium to navigate the viscous environment of the subgingival biofilm and adheres to tooth surfaces and periodontal pockets. It is typically found in symbiosis with other oral bacteria, forming complex microbial communities that influence host health and disease progression. As a chemoheterotroph, T. denticola derives energy from organic substrates, which include polysaccharides and proteins in the oral environment. This metabolic pathway is vital for its survival, especially in the nutrient-poor conditions of the periodontal pocket. This microbe is also noteworthy for its role in the pathogenicity of periodontal disease. It is linked to the degradation of the periodontal tissue, influencing inflammation and providing a favorable environment for further microbial colonization. Furthermore, T. denticola produces virulence factors such as proteases and endotoxins, contributing to tissue damage and the immune response. Its presence is often associated with the severity of periodontal disease, making it a target for therapeutic strategies aimed at improving oral health.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainATCC 35405

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Treponema denticola ATCC 35405

Accession NumberNC_002967.9

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2562 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1175279 - 1175294Not Available
Putative head closure proteinTDE_RS05480Not Available-1182958 - 118490173447.0
Major tail subunitTDE_RS05485Not Available-1184914 - 118550422339.7
hypothetical proteinTDE_RS05490Not Available-1185619 - 118605015835.0
Hypothetical proteinTDE_RS05495Not Available-1186064 - 118644714255.9
Putative major capsid proteinTDE_RS05500Not Available-1186516 - 118747835399.5
Hypothetical proteinTDE_RS05505Not Available-1187491 - 118833330387.4
hypothetical proteinTDE_RS05510Not Available-1188358 - 118862410173.3
Head-tail connector proteinTDE_RS05515Not Available-1188617 - 119029963844.8
Hypothetical proteinTDE_RS05520Not Available-1190352 - 119094822685.8

Displaying genes 1 – 10 of 2630 in total

Pathways

1 pathway

Metabolites

41 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003992adenosylcob(III)alamin 5'-phosphateC72H99CoN18O20P2Chemical structure of adenosylcob(III)alamin 5'-phosphateNot available
Average1657.572Da
Monoisotopic1656.610118Da
BASm0004093di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC87H139N7O23P2Chemical structure of di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1713.045Da
Monoisotopic1711.941952079Da
BASm0004094di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1->4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC95H152N8O28P2Chemical structure of di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1->4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1916.239Da
Monoisotopic1915.021324602Da
BASm0004172(R)-4'-phosphopantetheineC11H21N2O7PSChemical structure of (R)-4'-phosphopantetheineNot available
Average356.33Da
Monoisotopic356.081806356Da
BASm0004925UDP-N-acetyl-alpha-D-muramateC20H28N3O19P2Chemical structure of UDP-N-acetyl-alpha-D-muramateNot available
Average676.395Da
Monoisotopic676.080870429Da
BASm0008099(2E)-4-hydroxy-3-methylbut-2-enyl diphosphateC5H9O8P2Chemical structure of (2E)-4-hydroxy-3-methylbut-2-enyl diphosphateNot available
Average259.0677Da
Monoisotopic258.9772653Da
BASm0010825N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamideC8H13N2O9PChemical structure of N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamideNot available
Average312.172Da
Monoisotopic312.0369642Da
BASm00108262-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidineC8H15N3O8PChemical structure of 2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidineNot available
Average312.195Da
Monoisotopic312.060225Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da

Displaying 21–30 of 41 metabolites