Treponema denticola ATCC 35405

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola ATCC 35405 is a Gram-negative, spiral-shaped bacterium that thrives under anaerobic conditions, functioning as a chemoheterotroph. This microbe is primarily found in the oral cavity, especially within periodontal tissues where it contributes to oral diseases such as periodontitis. It is considered an obligate anaerobe, meaning that it cannot grow in the presence of oxygen, relying instead on the fermentation of organic compounds to meet its nutrition needs. The spiral shape of Treponema denticola is characteristic of the spirochete family, which enables its motility through a unique axial filament structure. This allows the bacterium to navigate the viscous environment of the subgingival biofilm and adheres to tooth surfaces and periodontal pockets. It is typically found in symbiosis with other oral bacteria, forming complex microbial communities that influence host health and disease progression. As a chemoheterotroph, T. denticola derives energy from organic substrates, which include polysaccharides and proteins in the oral environment. This metabolic pathway is vital for its survival, especially in the nutrient-poor conditions of the periodontal pocket. This microbe is also noteworthy for its role in the pathogenicity of periodontal disease. It is linked to the degradation of the periodontal tissue, influencing inflammation and providing a favorable environment for further microbial colonization. Furthermore, T. denticola produces virulence factors such as proteases and endotoxins, contributing to tissue damage and the immune response. Its presence is often associated with the severity of periodontal disease, making it a target for therapeutic strategies aimed at improving oral health.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainATCC 35405

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Treponema denticola ATCC 35405

Accession NumberNC_002967.9

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2562 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
peroxiredoxinTDE_RS00060Not Available+15548 - 1619524248.6
carbon starvation protein aTDE_RS00065Not Available+16308 - 1776252028.4
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase foldTDE_RS00070Not Available-17848 - 1872931293.6
tp0733 family outer membrane beta-barrel proteinTDE_RS00075Not Available+18930 - 1954722930.5
lipoproteinTDE_RS00080Not Available+19567 - 2060437598.5
rpn family recombination-promoting nuclease/putative transposaseTDE_RS00085Not Available+20597 - 2191949041.1
m42 family metallopeptidaseTDE_RS00090Not Available-21998 - 2302638249.5
lysm peptidoglycan-binding domain-containing proteinTDE_RS00095Not Available-23163 - 2366318748.0
formate--tetrahydrofolate ligaseTDE_RS00100Not Available-23755 - 2545860999.3
glycine--trna ligaseTDE_RS00105Not Available+25586 - 2694152935.6

Displaying genes 41 – 50 of 2630 in total

Pathways

1 pathway

Metabolites

41 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm0002858all-trans-undecaprenyl phosphateC55H89O4PChemical structure of all-trans-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm00030584-CDP-2-C-methyl-D-erythritol 2-phosphateC14H22N3O17P3Chemical structure of 4-CDP-2-C-methyl-D-erythritol 2-phosphateNot available
Average597.257Da
Monoisotopic597.0184016Da

Displaying 1–10 of 41 metabolites