Treponema denticola ATCC 35405

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola ATCC 35405 is a Gram-negative, spiral-shaped bacterium that thrives under anaerobic conditions, functioning as a chemoheterotroph. This microbe is primarily found in the oral cavity, especially within periodontal tissues where it contributes to oral diseases such as periodontitis. It is considered an obligate anaerobe, meaning that it cannot grow in the presence of oxygen, relying instead on the fermentation of organic compounds to meet its nutrition needs. The spiral shape of Treponema denticola is characteristic of the spirochete family, which enables its motility through a unique axial filament structure. This allows the bacterium to navigate the viscous environment of the subgingival biofilm and adheres to tooth surfaces and periodontal pockets. It is typically found in symbiosis with other oral bacteria, forming complex microbial communities that influence host health and disease progression. As a chemoheterotroph, T. denticola derives energy from organic substrates, which include polysaccharides and proteins in the oral environment. This metabolic pathway is vital for its survival, especially in the nutrient-poor conditions of the periodontal pocket. This microbe is also noteworthy for its role in the pathogenicity of periodontal disease. It is linked to the degradation of the periodontal tissue, influencing inflammation and providing a favorable environment for further microbial colonization. Furthermore, T. denticola produces virulence factors such as proteases and endotoxins, contributing to tissue damage and the immune response. Its presence is often associated with the severity of periodontal disease, making it a target for therapeutic strategies aimed at improving oral health.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainATCC 35405

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Treponema denticola ATCC 35405

Accession NumberNC_002967.9

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2562 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinTDE_RS05575Not Available-1198023 - 11982568681.63
hypothetical proteinTDE_RS05580Not Available-1198271 - 11984808104.7
hypothetical proteinTDE_RS05585Not Available-1198484 - 119880712710.6
hypothetical proteinTDE_RS05590Not Available-1198804 - 11990288641.36
hypothetical proteinTDE_RS05595Not Available-1199039 - 119957220690.6
helix-turn-helix transcriptional regulatorTDE_RS05600Not Available-1199569 - 11998089441.73
helix-turn-helix domain-containing proteinTDE_RS05605Not Available+1199940 - 120030213401.5
tetratricopeptide repeat proteinTDE_RS05610Not Available+1200315 - 120111830490.2
IntegraseTDE_RS05615Not Available-1201347 - 120241140035.8
AttrNot AvailableNot Available+1214754 - 1214769Not Available

Displaying genes 21 – 30 of 2630 in total

Pathways

1 pathway

Metabolites

41 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003116all-trans-undecaprenyl diphosphateC55H89O7P2Chemical structure of all-trans-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.6099999Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003334aldehydo-D-ribose 5-phosphateC5H11O8PChemical structure of aldehydo-D-ribose 5-phosphateNot available
Average230.1098Da
Monoisotopic230.0191538Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034972-C-methyl-D-erythritol 2,4-cyclic diphosphateC5H10O9P2Chemical structure of 2-C-methyl-D-erythritol 2,4-cyclic diphosphate143488-44-2
Average276.075Da
Monoisotopic275.9800049Da
BASm0003659(2S,3S)-3-methyl-L-aspartateC5H8NO4Chemical structure of (2S,3S)-3-methyl-L-aspartateNot available
Average146.123Da
Monoisotopic146.0458813Da
BASm0003934Co-precorrin-5BC43H42CoN4O16Chemical structure of Co-precorrin-5BNot available
Average929.759Da
Monoisotopic929.197164Da
BASm0003935Co-precorrin-6AC44H45CoN4O16Chemical structure of Co-precorrin-6ANot available
Average944.793Da
Monoisotopic944.22009Da
BASm0003986adenosylcob(III)inamide-GDPC68H95CoN21O21P2Chemical structure of adenosylcob(III)inamide-GDPNot available
Average1663.515Da
Monoisotopic1662.582406Da

Displaying 11–20 of 41 metabolites