Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TDE_RS09845 | Not Available | - | 2106160 - 2106855 | 26219.1 |
| tetratricopeptide repeat protein | TDE_RS09850 | Not Available | - | 2106878 - 2107606 | 27283.5 |
| sigma-54 interaction domain-containing protein | TDE_RS09855 | Not Available | - | 2107608 - 2109125 | 57373.2 |
| 30s ribosomal protein s1 | TDE_RS09860 | Not Available | - | 2109139 - 2111574 | 90177.1 |
| germn domain-containing protein | TDE_RS09865 | Not Available | + | 2111669 - 2112589 | 34618.0 |
| stas domain-containing protein | TDE_RS09870 | Not Available | - | 2112702 - 2113253 | 20219.5 |
| rna methyltransferase | TDE_RS09875 | Not Available | + | 2113534 - 2114289 | 28207.0 |
| ump kinase | TDE_RS09880 | Not Available | + | 2114322 - 2115017 | 25230.3 |
| dnaj domain-containing protein | TDE_RS09885 | Not Available | + | 2115017 - 2115535 | 19977.9 |
| translation initiation factor if-1 | TDE_RS09890 | Not Available | - | 2115558 - 2115776 | 8231.25 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
