Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | TDE_RS04650 | Not Available | - | 992653 - 993216 | 21102.2 |
| s41 family peptidase | TDE_RS04655 | Not Available | + | 993400 - 994635 | 47039.2 |
| hypothetical protein | TDE_RS04660 | Not Available | + | 995038 - 995244 | 8056.27 |
| arginine--trna ligase | TDE_RS04665 | Not Available | + | 995319 - 997091 | 66638.0 |
| comf family protein | TDE_RS04670 | Not Available | + | 997167 - 998021 | 32470.2 |
| radc family protein | TDE_RS04675 | Not Available | - | 998030 - 998707 | 25362.4 |
| rpn family recombination-promoting nuclease/putative transposase | TDE_RS04680 | Not Available | + | 999061 - 999939 | 33448.3 |
| formylglycine-generating enzyme family protein | TDE_RS04685 | Not Available | + | 1000555 - 1001700 | 41167.7 |
| leucine-rich repeat domain-containing protein | TDE_RS04690 | Not Available | + | 1002008 - 1002484 | 17288.9 |
| d-alanyl-d-alanine carboxypeptidase family protein | TDE_RS04695 | Not Available | - | 1002600 - 1004036 | 53751.2 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
