Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod/siga | TDE_RS04500 | Not Available | + | 960091 - 960951 | 32720.4 |
| class i sam-dependent rna methyltransferase | TDE_RS04505 | Not Available | - | 961053 - 962243 | 45274.5 |
| trab/gumn family protein | TDE_RS04510 | Not Available | + | 962339 - 963274 | 35380.8 |
| hypothetical protein | TDE_RS04515 | Not Available | + | 963276 - 963695 | 16008.1 |
| c40 family peptidase | TDE_RS04520 | Not Available | - | 963713 - 964192 | 17931.6 |
| amp-dependent synthetase/ligase | TDE_RS04525 | Not Available | + | 964272 - 965999 | 64084.7 |
| duf4469 domain-containing protein | TDE_RS04530 | Not Available | + | 966387 - 967097 | 26278.4 |
| formylglycine-generating enzyme family protein | TDE_RS04535 | Not Available | + | 967268 - 968380 | 40047.9 |
| hypothetical protein | TDE_RS04540 | Not Available | + | 968352 - 968795 | 16364.3 |
| elongation factor g | TDE_RS04545 | Not Available | - | 968804 - 970882 | 75745.3 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
