Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | TDE_RS04250 | Not Available | + | 900114 - 901196 | 38661.3 |
| 30s ribosomal protein s16 | TDE_RS04255 | Not Available | + | 901307 - 901552 | 9524.66 |
| kh domain-containing protein | TDE_RS04260 | Not Available | + | 901589 - 901822 | 8193.87 |
| ribosome maturation factor rimm | TDE_RS04265 | Not Available | + | 901825 - 902364 | 19978.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | TDE_RS04270 | Not Available | + | 902361 - 903092 | 27536.1 |
| 50s ribosomal protein l19 | TDE_RS04275 | Not Available | + | 903085 - 903444 | 13500.8 |
| hypothetical protein | TDE_RS04280 | Not Available | + | 903481 - 904434 | 35232.8 |
| pin domain-containing protein | TDE_RS04285 | Not Available | - | 904423 - 904842 | 16005.5 |
| duf6364 family protein | TDE_RS04290 | Not Available | - | 904823 - 905065 | 9375.39 |
| p13 family porin | TDE_RS04295 | Not Available | + | 905230 - 905874 | 23865.4 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
