Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yibe/f family protein | TDE_RS04205 | Not Available | + | 891610 - 892722 | 40572.9 |
| bifunctional metallophosphatase/5'-nucleotidase | TDE_RS04210 | Not Available | + | 892838 - 894736 | 71492.6 |
| recombinase reca | TDE_RS04215 | Not Available | + | 894981 - 896225 | 44641.6 |
| segregation and condensation protein a | TDE_RS04220 | Not Available | + | 896283 - 897059 | 30522.4 |
| smc-scp complex subunit scpb | TDE_RS04225 | Not Available | + | 897043 - 897594 | 20614.1 |
| pseudouridine synthase | TDE_RS04230 | Not Available | + | 897629 - 898333 | 26568.6 |
| helix-turn-helix domain-containing protein | TDE_RS04235 | Not Available | - | 898429 - 898614 | 7068.83 |
| alpha/beta hydrolase | TDE_RS04240 | Not Available | + | 898729 - 899679 | 34954.8 |
| type ii toxin-antitoxin system vapb family antitoxin | TDE_RS04245 | Not Available | + | 899792 - 899989 | 7687.25 |
| hypothetical protein | TDE_RS13350 | Not Available | + | 899986 - 900117 | 4927.0 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
