Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybga family protein | TDE_RS03850 | Not Available | - | 819678 - 820064 | 15312.7 |
| php domain-containing protein | TDE_RS03855 | Not Available | + | 820197 - 821006 | 30598.2 |
| acylphosphatase | TDE_RS03860 | Not Available | + | 820999 - 821283 | 10812.9 |
| mfs transporter | TDE_RS03865 | Not Available | - | 821319 - 822647 | 49029.6 |
| glycerophosphodiester phosphodiesterase | TDE_RS03870 | Not Available | + | 822749 - 823528 | 29628.9 |
| gnat family n-acetyltransferase | TDE_RS03875 | Not Available | - | 823544 - 823978 | 17067.5 |
| rrf2 family transcriptional regulator | TDE_RS03880 | Not Available | - | 824015 - 824449 | 15976.7 |
| sdr family oxidoreductase | TDE_RS03885 | Not Available | - | 824562 - 825197 | 23542.4 |
| hypothetical protein | TDE_RS03890 | Not Available | + | 825457 - 826935 | 55953.6 |
| rtcb family protein | TDE_RS03895 | Not Available | - | 826962 - 828089 | 42130.5 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
