Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | TDE_RS03300 | Not Available | - | 720755 - 721168 | 15047.4 |
| single-stranded dna-binding protein | TDE_RS03305 | Not Available | + | 721437 - 721832 | 14693.6 |
| sdr family nad(p)-dependent oxidoreductase | TDE_RS03310 | Not Available | - | 721913 - 722710 | 29470.9 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | TDE_RS03315 | Not Available | + | 722867 - 723817 | 36167.1 |
| phosphoribosylaminoimidazole carboxylase | TDE_RS03320 | Not Available | + | 723814 - 724293 | 17196.8 |
| hypothetical protein | TDE_RS03325 | Not Available | + | 724312 - 725817 | 58400.4 |
| s-methyl-5-thioribose kinase | TDE_RS03330 | Not Available | + | 725830 - 727032 | 46251.4 |
| trna 2-thiouridine(34) synthase mnma | TDE_RS03335 | Not Available | + | 727038 - 728138 | 41081.5 |
| abc transporter transmembrane domain-containing protein | TDE_RS03340 | Not Available | + | 728202 - 729788 | 59433.9 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | TDE_RS03345 | Not Available | + | 730082 - 730891 | 28984.2 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
