Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase nickel incorporation protein hypb | TDE_RS10250 | Not Available | - | 2197143 - 2197805 | 24287.7 |
| hydrogenase maturation nickel metallochaperone hypa | TDE_RS10255 | Not Available | - | 2197833 - 2198174 | 12614.3 |
| fad-dependent oxidoreductase | TDE_RS10260 | Not Available | - | 2198193 - 2200937 | 101887.0 |
| duf3784 domain-containing protein | TDE_RS10265 | Not Available | + | 2201177 - 2201569 | 14862.0 |
| class i sam-dependent methyltransferase | TDE_RS10270 | Not Available | - | 2201867 - 2202631 | 29376.1 |
| duf3847 domain-containing protein | TDE_RS10275 | Not Available | - | 2202827 - 2203078 | 10171.2 |
| acyl-coa thioester hydrolase/baat c-terminal domain-containing protein | TDE_RS10280 | Not Available | - | 2203189 - 2204124 | 35443.6 |
| transposon-encoded tnpw family protein | TDE_RS10285 | Not Available | - | 2204228 - 2204410 | 7060.48 |
| recombinase family protein | TDE_RS10290 | Not Available | - | 2204491 - 2206329 | 72646.7 |
| rpn family recombination-promoting nuclease/putative transposase | TDE_RS10295 | Not Available | - | 2206390 - 2206665 | 10534.8 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
