Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | TDE_RS09145 | Not Available | + | 1944124 - 1945878 | 65367.3 |
| sugar phosphate isomerase/epimerase family protein | TDE_RS09150 | Not Available | + | 1945888 - 1946643 | 29127.0 |
| hypothetical protein | TDE_RS09155 | Not Available | - | 1946664 - 1947521 | 32069.4 |
| hypothetical protein | TDE_RS09160 | Not Available | - | 1947522 - 1948646 | 42030.8 |
| cytidine deaminase | TDE_RS09165 | Not Available | + | 1948670 - 1949080 | 14581.3 |
| Trna-arg | Not Available | Not Available | + | 1949078 - 1949151 | Not Available |
| duf4469 domain-containing protein | TDE_RS09175 | Not Available | - | 1949221 - 1949499 | 9891.05 |
| hypothetical protein | TDE_RS09180 | Not Available | - | 1949690 - 1952701 | 107030.0 |
| hypothetical protein | TDE_RS09185 | Not Available | + | 1953226 - 1953414 | 7095.62 |
| rpn family recombination-promoting nuclease/putative transposase | TDE_RS09190 | Not Available | + | 1953780 - 1954646 | 33350.0 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
