Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | TDE_RS07935 | Not Available | - | 1707745 - 1708821 | 40424.3 |
| alanine--trna ligase | TDE_RS07940 | Not Available | - | 1708921 - 1710723 | 67095.0 |
| leucine-rich repeat domain-containing protein | TDE_RS07945 | Not Available | - | 1710800 - 1715356 | 164380.0 |
| duf2141 domain-containing protein | TDE_RS07950 | Not Available | + | 1715542 - 1715970 | 16273.9 |
| replicative dna helicase | TDE_RS07955 | Not Available | + | 1716038 - 1717375 | 49234.2 |
| ompa family protein | TDE_RS07960 | Not Available | + | 1717459 - 1717962 | 19230.1 |
| ompl47-type beta-barrel domain-containing protein | TDE_RS07965 | Not Available | + | 1718002 - 1719042 | 37885.6 |
| hypothetical protein | TDE_RS07970 | Not Available | + | 1719179 - 1720081 | 35242.7 |
| s-methyl-5-thioribose-1-phosphate isomerase | TDE_RS07975 | Not Available | - | 1720083 - 1721141 | 38920.6 |
| apc family permease | TDE_RS07980 | Not Available | + | 1721358 - 1722734 | 50261.8 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
