Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rpn family recombination-promoting nuclease/putative transposase | TDE_RS06435 | Not Available | + | 1382532 - 1383410 | 34344.7 |
| dna primase | TDE_RS06440 | Not Available | + | 1383579 - 1385366 | 67566.4 |
| rna polymerase sigma factor rpod | TDE_RS06445 | Not Available | + | 1385359 - 1387218 | 71858.9 |
| zinc ribbon domain-containing protein | TDE_RS06450 | Not Available | + | 1387265 - 1388092 | 31878.5 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 1388110 - 1388455 | Not Available |
| tetratricopeptide repeat protein | TDE_RS06460 | Not Available | + | 1388473 - 1389408 | 35841.0 |
| rod shape-determining protein | TDE_RS06465 | Not Available | + | 1389426 - 1390460 | 37159.5 |
| rod shape-determining protein mrec | TDE_RS06470 | Not Available | + | 1390467 - 1391330 | 32074.1 |
| rod shape-determining protein mred | TDE_RS06475 | Not Available | + | 1391335 - 1391853 | 19313.3 |
| penicillin-binding protein 2 | TDE_RS06480 | Not Available | + | 1391840 - 1393693 | 69750.9 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
