Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | TDE_RS05145 | Not Available | + | 1108535 - 1109740 | 44297.1 |
| fpra family a-type flavoprotein | TDE_RS05150 | Not Available | + | 1109879 - 1111105 | 46482.5 |
| pts sugar transporter subunit iia | TDE_RS05155 | Not Available | + | 1111218 - 1111865 | 24050.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | TDE_RS05160 | Not Available | + | 1111878 - 1112759 | 32968.1 |
| hypothetical protein | TDE_RS05165 | Not Available | + | 1112779 - 1113288 | 19188.0 |
| rlua family pseudouridine synthase | TDE_RS05170 | Not Available | + | 1113275 - 1114312 | 39063.1 |
| pseudouridine synthase family protein | TDE_RS05175 | Not Available | + | 1114306 - 1115091 | 29544.3 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | TDE_RS05180 | Not Available | - | 1115024 - 1116376 | 50549.1 |
| udp-n-acetylmuramate--l-alanine ligase | TDE_RS05185 | Not Available | + | 1116468 - 1117910 | 53354.9 |
| yicc/yloc family endoribonuclease | TDE_RS05190 | Not Available | + | 1117926 - 1118792 | 33269.0 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
