Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | ATCC 35405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema denticola ATCC 35405
Accession NumberNC_002967.9
Gene Summary
Adenine Count
881542 bp
Thymine Count
884832 bp
Guanine Count
533662 bp
Cytosine Count
543165 bp
Genome Length
2843201 bp
Protein-coding Genes
2562 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | TDE_RS04800 | Not Available | + | 1027793 - 1028497 | 25763.8 |
| tvp38/tmem64 family protein | TDE_RS04805 | Not Available | - | 1028535 - 1029227 | 25363.2 |
| flagellin | TDE_RS04810 | Not Available | - | 1029366 - 1030226 | 31566.7 |
| flagellar basal-body rod protein flgf | TDE_RS04815 | Not Available | + | 1030567 - 1031379 | 30186.9 |
| flagellar basal-body rod protein flgg | TDE_RS04820 | Not Available | + | 1031401 - 1032195 | 28793.9 |
| rod-binding protein | TDE_RS04825 | Not Available | + | 1032246 - 1032866 | 22645.6 |
| cache domain-containing protein | TDE_RS04830 | Not Available | - | 1033093 - 1035186 | 75344.0 |
| excinuclease abc subunit uvra | TDE_RS04835 | Not Available | + | 1035367 - 1038231 | 105614.0 |
| lps-assembly protein lptd | TDE_RS04840 | Not Available | + | 1038241 - 1041462 | 122504.0 |
| helix-hairpin-helix domain-containing protein | TDE_RS04845 | Not Available | + | 1041512 - 1043986 | 91131.0 |
Pathways
1 pathway
treponema metabolism
treponema metabolism
