Hyphomonas neptunium ATCC 15444

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomonadales

Family

Hyphomonadaceae

Genus

Hyphomonas

Description

Hyphomonas neptunium, a marine member of the dimorphic prosthecate bacteria (DPB) differs from C. crescentus in that H. neptunium uses its stalk as a reproductive structure. DPB are alpha-proteobacteria that reproduce in an asymmetric manner rather than by binary fission and are of interest as simple models of development. This organism shares more genes with Cauobacter crescentus than it does with Silicibacter pomeroyi (a closer relative according to 16S rRNA phylogeny).; however C.crescentus is also a DPB. Analysis of the H.neptunium genome indicates that it relies upon a heterotrophic strategy utilizing a wide range of substrates, that its cell cycle is likely to be regulated in a similar manner to that of C. crescentus, and that the outer membrane complements of H. neptunium and C. crescentus are remarkably similar. H. neptunium swarmer cells are highly motile via a single polar flagellum. With the exception of cheY and cheR, genes required for chemotaxis were absent in the H. neptunium genome. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomonadales
FamilyHyphomonadaceae
GenusHyphomonas
SpeciesHyphomonas neptunium
StrainATCC 15444

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Hyphomonas neptunium ATCC 15444
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomonas neptunium ATCC 15444

Accession NumberNC_008358.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3516 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pyruvate, water dikinase regulatory proteinHNE_RS00005Not Available+258 - 110031515.7
maf family proteinHNE_RS00010Not Available+1097 - 169321516.2
shikimate dehydrogenaseHNE_RS00015Not Available+1690 - 250228487.1
dephospho-coa kinaseHNE_RS00020Not Available+2499 - 310721774.2
dna polymerase iii subunit epsilonHNE_RS00025Not Available+3104 - 380225736.7
protein-export chaperone secbHNE_RS00030Not Available-3810 - 431017729.0
tim44/tima family putative adaptor proteinHNE_RS00035Not Available+4445 - 505922651.8
murein transglycosylase aHNE_RS00040Not Available+5111 - 634943984.2
smr/muts family proteinHNE_RS00045Not Available+6355 - 688519205.2
duf1013 domain-containing proteinHNE_RS00050Not Available-6941 - 761224933.6

Displaying genes 1 – 10 of 3565 in total

Pathways

23 pathways

Metabolites

141 records
Metabolite IDMetabolite nameStructureCAS number
BASm00189092-dodecanoyl-sn-glycerol 3-phosphateC15H31O7PChemical structure of 2-dodecanoyl-sn-glycerol 3-phosphateNULL
Average354.3762Da
Monoisotopic354.180739858Da
BASm00189102-hexadec-9-enoyl-sn-glycerol 3-phosphateC19H37O7PNot availableNULL
Average408.472Da
Monoisotopic408.227690529Da
BASm00189112-hexadecanoyl-sn-glycerol 3-phosphateC19H39O7PNot availableNULL
Average410.488Da
Monoisotopic410.243340594Da
BASm00189122-octadec-11-enoyl-sn-glycerol 3-phosphateC21H41O7PNot availableNULL
Average436.526Da
Monoisotopic436.258990658Da
BASm00189132-octadecanoyl-sn-glycerol 3-phosphateC21H43O7PChemical structure of 2-octadecanoyl-sn-glycerol 3-phosphateNULL
Average438.5357Da
Monoisotopic438.274640242Da
BASm00189142-tetradec-7-enoyl-sn-glycerol 3-phosphateC17H33O7PChemical structure of 2-tetradec-7-enoyl-sn-glycerol 3-phosphateNULL
Average380.4135Da
Monoisotopic380.196389922Da
BASm00189152-tetradecanoyl-sn-glycerol 3-phosphateC17H35O7PChemical structure of 2-tetradecanoyl-sn-glycerol 3-phosphateNULL
Average382.4294Da
Monoisotopic382.212039986Da
BASm0018974Tetradecenoate (N-C14:1)C14H25O2Chemical structure of Tetradecenoate (N-C14:1)NULL
Average225.3471Da
Monoisotopic225.185455044Da
BASm00191503b-AllotetrahydrocortisolC19H35N5O6SeChemical structure of 3b-AllotetrahydrocortisolNULL
Average508.489Da
Monoisotopic509.175256Da
BASm0019191PE(16:1(9Z)/18:1(9Z))C39H74NO8PChemical structure of PE(16:1(9Z)/18:1(9Z))NULL
Average715.994Da
Monoisotopic715.515205345Da

Displaying 101–110 of 141 metabolites