Hyphomonas pacifica

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomonadales

Family

Hyphomonadaceae

Genus

Hyphomonas

Description

Hyphomonas pacifica is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which enable motility. This organism has a single replicon, indicating a streamlined genetic structure that is often associated with certain prokaryotic life forms. The genomic data for Hyphomonas pacifica is cataloged under the accession number AWFA00000000.1, which provides a reference for researchers seeking to study its genetic characteristics further. As a member of the Hyphomonadaceae family, Hyphomonas pacifica is typically found in marine environments, where it plays a role in the microbial community dynamics. Its motility and rod shape may offer advantages in nutrient acquisition and adaptation to fluctuating environmental conditions. Understanding such traits is essential for elucidating the ecological roles of this bacterium in its natural habitat. In summary, the traits of Hyphomonas pacifica, including its Gram-negative status, rod shape, flagella presence, and genomic structure, contribute to its ecological interactions and potential functions within marine ecosystems. Further research could explore its role in nutrient cycling and interactions with other microorganisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomonadales
FamilyHyphomonadaceae
GenusHyphomonas
SpeciesHyphomonas pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Hyphomonas pacifica
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomonas pacifica strain T16B2 contig93, whole genome shotgun

Gene Summary

Adenine Count

711367 bp

Thymine Count

708009 bp

Guanine Count

1000042 bp

Cytosine Count

999279 bp

Genome Length

3418697 bp

Protein-coding Genes

3292 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Large packaging proteinHY2_05550Not AvailablePositive3179744 - 318106647951.4
hypothetical proteinHY2_05555Not AvailablePositive3181264 - 318168915186.2
Isbm1, transposase orfaHY2_05560Not AvailableNegative3181800 - 31819676535.91
Putative acetyltransferaseHY2_05565Not AvailablePositive3182078 - 318250916112.2
hypothetical proteinHY2_05570Not AvailablePositive3182586 - 318298114667.3
hypothetical proteinHY2_05575Not AvailableNegative3183006 - 318347916947.1
Plasmid partition protein sopaHY2_05580Not AvailableNegative3183476 - 318436032473.1
Portal proteinHY2_05585Not AvailablePositive3184578 - 318574441582.9
hypothetical proteinHY2_05590Not AvailablePositive3185741 - 31859718532.36
Putative prohead proteaseHY2_05595Not AvailablePositive3186228 - 318651510333.8

Displaying genes 1 – 10 of 3348 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.