Hyphomonas neptunium ATCC 15444

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomonadales

Family

Hyphomonadaceae

Genus

Hyphomonas

Description

Hyphomonas neptunium, a marine member of the dimorphic prosthecate bacteria (DPB) differs from C. crescentus in that H. neptunium uses its stalk as a reproductive structure. DPB are alpha-proteobacteria that reproduce in an asymmetric manner rather than by binary fission and are of interest as simple models of development. This organism shares more genes with Cauobacter crescentus than it does with Silicibacter pomeroyi (a closer relative according to 16S rRNA phylogeny).; however C.crescentus is also a DPB. Analysis of the H.neptunium genome indicates that it relies upon a heterotrophic strategy utilizing a wide range of substrates, that its cell cycle is likely to be regulated in a similar manner to that of C. crescentus, and that the outer membrane complements of H. neptunium and C. crescentus are remarkably similar. H. neptunium swarmer cells are highly motile via a single polar flagellum. With the exception of cheY and cheR, genes required for chemotaxis were absent in the H. neptunium genome. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomonadales
FamilyHyphomonadaceae
GenusHyphomonas
SpeciesHyphomonas neptunium
StrainATCC 15444

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Hyphomonas neptunium ATCC 15444
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomonas neptunium ATCC 15444

Accession NumberNC_008358.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3516 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pyruvate, water dikinase regulatory proteinHNE_RS00005Not Available+258 - 110031515.7
maf family proteinHNE_RS00010Not Available+1097 - 169321516.2
shikimate dehydrogenaseHNE_RS00015Not Available+1690 - 250228487.1
dephospho-coa kinaseHNE_RS00020Not Available+2499 - 310721774.2
dna polymerase iii subunit epsilonHNE_RS00025Not Available+3104 - 380225736.7
protein-export chaperone secbHNE_RS00030Not Available-3810 - 431017729.0
tim44/tima family putative adaptor proteinHNE_RS00035Not Available+4445 - 505922651.8
murein transglycosylase aHNE_RS00040Not Available+5111 - 634943984.2
smr/muts family proteinHNE_RS00045Not Available+6355 - 688519205.2
duf1013 domain-containing proteinHNE_RS00050Not Available-6941 - 761224933.6

Displaying genes 1 – 10 of 3565 in total

Pathways

23 pathways

Metabolites

141 records
Metabolite IDMetabolite nameStructureCAS number
BASm00188942-Acyl-sn-glycero-3-phosphoethanolamine (N-C12:0)C17H36NO7PNot availableNULL
Average397.449Da
Monoisotopic397.222939501Da
BASm00188952-Acyl-sn-glycero-3-phosphoethanolamine (N-C14:0)C19H40NO7PNot availableNULL
Average425.503Da
Monoisotopic425.25423963Da
BASm00188972-Acyl-sn-glycero-3-phosphoethanolamine (N-C16:0)C21H44NO7PChemical structure of 2-Acyl-sn-glycero-3-phosphoethanolamine (N-C16:0)NULL
Average453.5503Da
Monoisotopic453.285539279Da
BASm00188992-Acyl-sn-glycero-3-phosphoethanolamine (N-C18:0)C23H48NO7PChemical structure of 2-Acyl-sn-glycero-3-phosphoethanolamine (N-C18:0)NULL
Average481.6035Da
Monoisotopic481.316839407Da
BASm00189012-Acyl-sn-glycero-3-phosphoglycerol (N-C14:0)C20H40O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C14:0)NULL
Average455.5Da
Monoisotopic455.24099439Da
BASm00189022-Acyl-sn-glycero-3-phosphoglycerol (N-C14:1)C20H38O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C14:1)NULL
Average453.4841Da
Monoisotopic453.225344326Da
BASm00189032-Acyl-sn-glycero-3-phosphoglycerol (N-C16:0)C22H44O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C16:0)NULL
Average483.5531Da
Monoisotopic483.272294518Da
BASm00189042-Acyl-sn-glycero-3-phosphoglycerol (N-C16:1)C22H42O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C16:1)NULL
Average481.5372Da
Monoisotopic481.256644454Da
BASm00189052-Acyl-sn-glycero-3-phosphoglycerol (N-C18:0)C24H48O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C18:0)NULL
Average511.6063Da
Monoisotopic511.303594646Da
BASm00189062-Acyl-sn-glycero-3-phosphoglycerol (N-C18:1)C24H46O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C18:1)NULL
Average509.5904Da
Monoisotopic509.287944582Da

Displaying 91–100 of 141 metabolites