Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema berlinense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Treponema berlinense
Accession NumberFUXC00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase family protein | SAMN02745152_00408 | Not Available | + | 460133 - 460939 | 30057.9 |
| hd domain-containing protein | SAMN02745152_00409 | Not Available | - | 460969 - 462219 | 47068.7 |
| uncharacterized conserved protein | SAMN02745152_00410 | Not Available | - | 462582 - 464435 | 70295.6 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN02745152_00411 | Not Available | - | 464416 - 466296 | 68368.9 |
| signal peptidase i | SAMN02745152_00412 | Not Available | - | 466287 - 466805 | 18958.1 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN02745152_00413 | Not Available | + | 466849 - 468042 | 43350.4 |
| hypothetical protein | SAMN02745152_00414 | Not Available | + | 468048 - 468290 | 9170.16 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN02745152_00415 | Not Available | + | 468287 - 470500 | 82045.7 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN02745152_00416 | Not Available | - | 470501 - 471949 | 53142.8 |
| pectin methylesterase | SAMN02745152_00417 | Not Available | - | 472159 - 475974 | 140428.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
