Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema berlinense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Treponema berlinense
Accession NumberFUXC00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily f, uup | SAMN02745152_01233 | Not Available | - | 1417791 - 1419785 | 75229.5 |
| transcriptional regulator, arsr family | SAMN02745152_01234 | Not Available | + | 1419949 - 1420251 | 11242.6 |
| cd2+/zn2+-exporting atpase | SAMN02745152_01235 | Not Available | + | 1420356 - 1422500 | 77982.0 |
| pectate lyase | SAMN02745152_01236 | Not Available | + | 1422733 - 1424037 | 48473.0 |
| hypothetical protein | SAMN02745152_01237 | Not Available | + | 1424253 - 1425248 | 38081.2 |
| pectinesterase | SAMN02745152_01238 | Not Available | + | 1425391 - 1426380 | 36901.4 |
| polygalacturonase | SAMN02745152_01239 | Not Available | + | 1426576 - 1427931 | 49079.4 |
| ig-like domain (group 3) | SAMN02745152_01240 | Not Available | + | 1428126 - 1438829 | 388762.0 |
| amino acid abc transporter substrate-binding protein, paat family (tc 3.a.1.3.-) | SAMN02745152_01241 | Not Available | + | 1439193 - 1439966 | 27625.0 |
| polar amino acid transport system permease protein | SAMN02745152_01242 | Not Available | + | 1440184 - 1440855 | 24375.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
