Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cpaf family protein | AJAP_RS38110 | Not Available | - | 8214382 - 8215758 | 49380.8 |
| carbon monoxide dehydrogenase maturation protein | AJAP_RS44205 | Not Available | - | 8215755 - 8216615 | 29112.8 |
| saf domain-containing protein | AJAP_RS38120 | Not Available | - | 8216681 - 8217391 | 23415.2 |
| hypothetical protein | AJAP_RS38125 | Not Available | - | 8217516 - 8218361 | 28910.6 |
| hypothetical protein | AJAP_RS38130 | Not Available | - | 8218526 - 8219101 | 19920.1 |
| prepilin peptidase | AJAP_RS38135 | Not Available | + | 8219324 - 8219971 | 21985.4 |
| duf6355 family natural product biosynthesis protein | AJAP_RS45270 | Not Available | - | 8220333 - 8220788 | 15731.8 |
| helix-turn-helix domain-containing protein | AJAP_RS38140 | Not Available | - | 8221095 - 8223395 | 83239.5 |
| hypothetical protein | AJAP_RS38145 | Not Available | + | 8223696 - 8224175 | 17657.9 |
| hypothetical protein | AJAP_RS38150 | Not Available | + | 8224241 - 8224786 | 20272.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.