Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AJAP_RS45000 | Not Available | - | 8170811 - 8171092 | 10413.6 |
| hypothetical protein | AJAP_RS37890 | Not Available | - | 8171256 - 8172242 | 36075.1 |
| recombinase family protein | AJAP_RS37895 | Not Available | - | 8172245 - 8172934 | 26034.8 |
| hypothetical protein | AJAP_RS44565 | Not Available | - | 8173034 - 8173525 | 17807.4 |
| hypothetical protein | AJAP_RS44655 | Not Available | - | 8173479 - 8173685 | 7360.94 |
| hypothetical protein | AJAP_RS45005 | Not Available | + | 8173780 - 8174115 | 11526.5 |
| ydcf family protein | AJAP_RS45010 | Not Available | - | 8174278 - 8174754 | 16611.1 |
| dna methyltransferase | AJAP_RS37910 | Not Available | - | 8174896 - 8175978 | 38465.7 |
| hypothetical protein | AJAP_RS37915 | Not Available | - | 8176047 - 8176841 | 26660.2 |
| hypothetical protein | AJAP_RS37920 | Not Available | + | 8176831 - 8177031 | 6555.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.