Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybjn domain-containing protein | AJAP_RS36840 | Not Available | - | 7968176 - 7968691 | 19266.6 |
| d-inositol-3-phosphate glycosyltransferase | AJAP_RS36845 | Not Available | - | 7968688 - 7969992 | 46362.5 |
| alpha/beta fold hydrolase | AJAP_RS36850 | Not Available | - | 7970014 - 7970826 | 28490.9 |
| ig-like domain-containing protein | AJAP_RS36855 | Not Available | - | 7970995 - 7972170 | 41573.7 |
| udp-n-acetylmuramate dehydrogenase | AJAP_RS36860 | Not Available | - | 7972308 - 7973360 | 36607.4 |
| duf2505 domain-containing protein | AJAP_RS36865 | Not Available | + | 7973387 - 7973884 | 17698.9 |
| methylase | AJAP_RS36870 | Not Available | + | 7973866 - 7974663 | 29329.4 |
| deda family protein | AJAP_RS36875 | Not Available | + | 7974727 - 7975386 | 23113.7 |
| formyltetrahydrofolate deformylase | AJAP_RS36880 | Not Available | + | 7975364 - 7976248 | 32270.4 |
| pyridoxamine 5'-phosphate oxidase family protein | AJAP_RS36885 | Not Available | + | 7976264 - 7976893 | 22936.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.