Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin family protein | AJAP_RS36745 | Not Available | - | 7948199 - 7948435 | 8907.39 |
| amp-binding protein | AJAP_RS36750 | Not Available | - | 7948446 - 7949924 | 51475.1 |
| sigma-70 family rna polymerase sigma factor | AJAP_RS36755 | Not Available | + | 7950217 - 7950924 | 25685.8 |
| duf5667 domain-containing protein | AJAP_RS36760 | Not Available | + | 7951034 - 7952116 | 37180.8 |
| had family hydrolase | AJAP_RS36765 | Not Available | + | 7952213 - 7953115 | 32188.6 |
| lysophospholipid acyltransferase family protein | AJAP_RS36770 | Not Available | - | 7953459 - 7954550 | 39561.2 |
| nad-dependent epimerase/dehydratase family protein | AJAP_RS36775 | Not Available | - | 7954547 - 7955596 | 37342.4 |
| 30s ribosomal protein bs22 | AJAP_RS43300 | Not Available | - | 7955883 - 7955984 | 4103.4 |
| helix-turn-helix domain-containing protein | AJAP_RS36780 | Not Available | - | 7956130 - 7956345 | 7889.65 |
| pyrroline-5-carboxylate reductase | AJAP_RS36785 | Not Available | - | 7956539 - 7957354 | 28210.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.