Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix transcriptional regulator | AJAP_RS04585 | Not Available | - | 910044 - 910229 | 6802.3 |
| nadh:flavin oxidoreductase/nadh oxidase family protein | AJAP_RS04590 | Not Available | + | 910565 - 911794 | 44106.0 |
| pr6pr family membrane protein | AJAP_RS04595 | Not Available | - | 911738 - 912439 | 24748.4 |
| nbr1-ig-like domain-containing protein | AJAP_RS04600 | Not Available | + | 912557 - 913384 | 29667.0 |
| hypothetical protein | AJAP_RS04605 | Not Available | + | 913565 - 913906 | 11878.5 |
| hypothetical protein | AJAP_RS04610 | Not Available | + | 913903 - 914280 | 13447.4 |
| atp-dependent dna ligase | AJAP_RS04615 | Not Available | - | 914346 - 915857 | 54443.6 |
| helix-turn-helix domain-containing protein | AJAP_RS04620 | Not Available | - | 915895 - 916737 | 31666.8 |
| ydcf family protein | AJAP_RS04625 | Not Available | + | 916872 - 917702 | 27953.0 |
| srpbcc family protein | AJAP_RS45300 | Not Available | - | 917700 - 918200 | 18044.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.